Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.88□□□□□ -0.51
ClppO88696 Gm14277-201ENSMUST00000121195 360 ntBASIC11.88□□□□□ -0.51
ClppO88696 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.88□□□□□ -0.51
ClppO88696 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.88□□□□□ -0.51
ClppO88696 Gm28882-201ENSMUST00000185504 314 ntBASIC11.88□□□□□ -0.51
ClppO88696 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.88□□□□□ -0.51
ClppO88696 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.88□□□□□ -0.51
ClppO88696 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.88□□□□□ -0.51
ClppO88696 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.88□□□□□ -0.51
ClppO88696 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Gm10076-201ENSMUST00000073238 384 ntBASIC11.88□□□□□ -0.51
ClppO88696 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
ClppO88696 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.88□□□□□ -0.51
ClppO88696 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ClppO88696 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.88□□□□□ -0.51
ClppO88696 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ClppO88696 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ClppO88696 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
ClppO88696 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
ClppO88696 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
ClppO88696 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.87□□□□□ -0.51
ClppO88696 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.87□□□□□ -0.51
ClppO88696 Gm14832-201ENSMUST00000121289 322 ntBASIC11.87□□□□□ -0.51
ClppO88696 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.87□□□□□ -0.51
ClppO88696 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
ClppO88696 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
ClppO88696 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ClppO88696 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.87□□□□□ -0.51
ClppO88696 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.87□□□□□ -0.51
ClppO88696 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.87□□□□□ -0.51
ClppO88696 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.87□□□□□ -0.51
ClppO88696 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
ClppO88696 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
ClppO88696 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
ClppO88696 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
ClppO88696 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.87□□□□□ -0.51
ClppO88696 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
ClppO88696 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ClppO88696 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClppO88696 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ClppO88696 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ClppO88696 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ClppO88696 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ClppO88696 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms