Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.24□□□□□ -0.45
Limk2O54785 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Limk2O54785 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.24□□□□□ -0.45
Limk2O54785 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.24□□□□□ -0.45
Limk2O54785 Gm13611-201ENSMUST00000118269 318 ntBASIC12.24□□□□□ -0.45
Limk2O54785 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.24□□□□□ -0.45
Limk2O54785 Gm9550-201ENSMUST00000161130 862 ntBASIC12.24□□□□□ -0.45
Limk2O54785 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Limk2O54785 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.24□□□□□ -0.45
Limk2O54785 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.24□□□□□ -0.45
Limk2O54785 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.24□□□□□ -0.45
Limk2O54785 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.24□□□□□ -0.45
Limk2O54785 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.24□□□□□ -0.45
Limk2O54785 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.24□□□□□ -0.45
Limk2O54785 Gm35960-201ENSMUST00000202712 767 ntBASIC12.24□□□□□ -0.45
Limk2O54785 Gm17812-201ENSMUST00000204935 318 ntBASIC12.24□□□□□ -0.45
Limk2O54785 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Limk2O54785 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.24□□□□□ -0.45
Limk2O54785 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.24□□□□□ -0.45
Limk2O54785 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Limk2O54785 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Limk2O54785 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.23□□□□□ -0.45
Limk2O54785 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Limk2O54785 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.23□□□□□ -0.45
Limk2O54785 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Limk2O54785 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.23□□□□□ -0.45
Limk2O54785 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Limk2O54785 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Limk2O54785 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.23□□□□□ -0.45
Limk2O54785 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.23□□□□□ -0.45
Limk2O54785 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Map1b-203ENSMUST00000223725 2669 ntBASIC12.23□□□□□ -0.45
Limk2O54785 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.23□□□□□ -0.45
Limk2O54785 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Limk2O54785 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Limk2O54785 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.23□□□□□ -0.45
Limk2O54785 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Limk2O54785 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.23□□□□□ -0.45
Limk2O54785 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.23□□□□□ -0.45
Limk2O54785 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.23□□□□□ -0.45
Limk2O54785 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.23□□□□□ -0.45
Limk2O54785 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.23□□□□□ -0.45
Limk2O54785 Gm45118-201ENSMUST00000208928 825 ntBASIC12.23□□□□□ -0.45
Limk2O54785 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
Limk2O54785 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.23□□□□□ -0.45
Limk2O54785 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.23□□□□□ -0.45
Limk2O54785 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.23□□□□□ -0.45
Limk2O54785 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Limk2O54785 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms