Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.39□□□□□ -0.43
Ptch2O35595 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.39□□□□□ -0.43
Ptch2O35595 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.39□□□□□ -0.43
Ptch2O35595 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ptch2O35595 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.39□□□□□ -0.43
Ptch2O35595 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 Ginm1-202ENSMUST00000065124 300 ntBASIC12.39□□□□□ -0.43
Ptch2O35595 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ptch2O35595 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ptch2O35595 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.39□□□□□ -0.43
Ptch2O35595 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ptch2O35595 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.39□□□□□ -0.43
Ptch2O35595 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ptch2O35595 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptch2O35595 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.39□□□□□ -0.43
Ptch2O35595 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.39□□□□□ -0.43
Ptch2O35595 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.38□□□□□ -0.43
Ptch2O35595 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.38□□□□□ -0.43
Ptch2O35595 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Ptch2O35595 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Gm43184-201ENSMUST00000197247 542 ntBASIC12.38□□□□□ -0.43
Ptch2O35595 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.38□□□□□ -0.43
Ptch2O35595 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ptch2O35595 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ptch2O35595 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ptch2O35595 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ptch2O35595 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ptch2O35595 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptch2O35595 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.38□□□□□ -0.43
Ptch2O35595 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ptch2O35595 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.37□□□□□ -0.43
Ptch2O35595 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.37□□□□□ -0.43
Ptch2O35595 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.37□□□□□ -0.43
Ptch2O35595 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ptch2O35595 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Gm26286-201ENSMUST00000104166 134 ntBASIC12.37□□□□□ -0.43
Ptch2O35595 Gm12857-201ENSMUST00000117678 592 ntBASIC12.37□□□□□ -0.43
Ptch2O35595 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.37□□□□□ -0.43
Ptch2O35595 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.37□□□□□ -0.43
Ptch2O35595 Gm4157-201ENSMUST00000211647 679 ntBASIC12.37□□□□□ -0.43
Ptch2O35595 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.37□□□□□ -0.43
Ptch2O35595 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.37□□□□□ -0.43
Ptch2O35595 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.37□□□□□ -0.43
Ptch2O35595 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ptch2O35595 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ptch2O35595 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Ptch2O35595 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms