Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Gm11793-201ENSMUST00000120433 981 ntBASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Mospd4-201ENSMUST00000180618 576 ntBASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh9F8VPK8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Pcdh9F8VPK8 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms