Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Gm18983-201ENSMUST00000222884 2729 ntBASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Gm12036-201ENSMUST00000120008 530 ntBASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Gm14993-201ENSMUST00000121180 164 ntBASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Gm5340-201ENSMUST00000203733 880 ntBASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC16.67■□□□□ 0.26
Hfm1D3Z4R1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Gm16219-201ENSMUST00000120096 274 ntBASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Mir1905-201ENSMUST00000122779 82 ntBASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Gm21778-201ENSMUST00000178779 471 ntBASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 AC134248.1-201ENSMUST00000216113 1176 ntBASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Gm14005-208ENSMUST00000223654 681 ntBASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hfm1D3Z4R1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Gm15528-201ENSMUST00000117821 864 ntBASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Gm15620-201ENSMUST00000122949 270 ntBASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Gm12906-201ENSMUST00000154610 441 ntBASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Gm16030-201ENSMUST00000159098 603 ntBASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Gm34379-201ENSMUST00000195036 290 ntBASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 CT030170.2-201ENSMUST00000223267 126 ntBASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hfm1D3Z4R1 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Hfm1D3Z4R1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Gm43752-201ENSMUST00000198475 697 ntBASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms