Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm6736-201ENSMUST00000166583 948 ntBASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 AC139580.1-202ENSMUST00000223574 928 ntBASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 AC238811.1-201ENSMUST00000225302 441 ntBASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm6124-201ENSMUST00000188240 2580 ntBASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm21939-201ENSMUST00000221137 2773 ntBASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm13394-201ENSMUST00000121658 1000 ntBASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm14760-201ENSMUST00000121831 999 ntBASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm26308-201ENSMUST00000157768 69 ntBASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm43094-201ENSMUST00000196549 921 ntBASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm42550-201ENSMUST00000201553 960 ntBASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm7775-201ENSMUST00000218871 853 ntBASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Rn7sk-201ENSMUST00000083103 331 ntBASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm26315-201ENSMUST00000083890 321 ntBASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm43963-201ENSMUST00000203466 2488 ntBASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms