Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Abhd6-203ENSMUST00000225234 1958 ntBASIC9.29□□□□□ -0.92
PdfS4R2K0 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.29□□□□□ -0.92
PdfS4R2K0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.29□□□□□ -0.92
PdfS4R2K0 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
PdfS4R2K0 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
PdfS4R2K0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Gm8131-201ENSMUST00000213783 1570 ntBASIC9.29□□□□□ -0.92
PdfS4R2K0 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Gm13689-201ENSMUST00000119360 685 ntBASIC9.28□□□□□ -0.92
PdfS4R2K0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.28□□□□□ -0.92
PdfS4R2K0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Gm8227-201ENSMUST00000223306 571 ntBASIC9.28□□□□□ -0.92
PdfS4R2K0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.28□□□□□ -0.92
PdfS4R2K0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PdfS4R2K0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
PdfS4R2K0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
PdfS4R2K0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
PdfS4R2K0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
PdfS4R2K0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.27□□□□□ -0.93
PdfS4R2K0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
PdfS4R2K0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.27□□□□□ -0.93
PdfS4R2K0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
PdfS4R2K0 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.27□□□□□ -0.93
PdfS4R2K0 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
PdfS4R2K0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PdfS4R2K0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.27□□□□□ -0.93
PdfS4R2K0 Gm11978-201ENSMUST00000122315 466 ntBASIC9.27□□□□□ -0.93
PdfS4R2K0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.27□□□□□ -0.93
PdfS4R2K0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.27□□□□□ -0.93
PdfS4R2K0 Gm24196-201ENSMUST00000179161 110 ntBASIC9.27□□□□□ -0.93
PdfS4R2K0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms