Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Gm24934-201ENSMUST00000103764 111 ntBASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Gm14832-201ENSMUST00000121289 322 ntBASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Gm24845-201ENSMUST00000158034 109 ntBASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Cts7-204ENSMUST00000225321 1257 ntBASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.16□□□□□ -0.62
ClcnkaQ9WUB7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClcnkaQ9WUB7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms