Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Gm14832-201ENSMUST00000121289 322 ntBASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Gm15547-201ENSMUST00000122152 333 ntBASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Gm35960-201ENSMUST00000202712 767 ntBASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf40aQ9R1C7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf40aQ9R1C7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf40aQ9R1C7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Gm42651-201ENSMUST00000199851 1339 ntBASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Prpf40aQ9R1C7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm24934-201ENSMUST00000103764 111 ntBASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm11930-201ENSMUST00000117788 190 ntBASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.32□□□□□ -0.28
Prpf40aQ9R1C7 Gm14381-201ENSMUST00000122105 414 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms