Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm23745-201ENSMUST00000104230 125 ntBASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm23604-201ENSMUST00000104311 132 ntBASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm20781-201ENSMUST00000193154 693 ntBASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm21736-201ENSMUST00000195399 693 ntBASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm8255-201ENSMUST00000218693 305 ntBASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm26174-201ENSMUST00000158415 219 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm37284-201ENSMUST00000193607 539 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm30946-201ENSMUST00000198288 724 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm25148-201ENSMUST00000104611 123 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm12986-201ENSMUST00000119037 967 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm3828-201ENSMUST00000121817 257 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm25872-201ENSMUST00000177784 100 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Gm9625-201ENSMUST00000180422 955 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Col4a4Q9QZR9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a4Q9QZR9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Col4a4Q9QZR9 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a4Q9QZR9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a4Q9QZR9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a4Q9QZR9 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms