Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Gm38144-201ENSMUST00000192790 465 ntBASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.8□□□□□ -0.68
Trem1Q9JKE2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trem1Q9JKE2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Btrc-206ENSMUST00000224102 3037 ntBASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Gm7775-201ENSMUST00000218871 853 ntBASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms