Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Gm26134-201ENSMUST00000178484 110 ntBASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Gm28324-201ENSMUST00000187913 264 ntBASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Gm18776-201ENSMUST00000188833 654 ntBASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1fQ9JIS7 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Gm17192-201ENSMUST00000169031 511 ntBASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1fQ9JIS7 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Gm10169-201ENSMUST00000121822 348 ntBASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.52□□□□□ -0.24
Cacna1fQ9JIS7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Gm25053-201ENSMUST00000103982 133 ntBASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Gm25922-201ENSMUST00000104281 130 ntBASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Gm12791-201ENSMUST00000120788 655 ntBASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Gm24679-201ENSMUST00000158762 111 ntBASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Gm25053-202ENSMUST00000199731 132 ntBASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1fQ9JIS7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms