Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rrp8Q9DB85 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Gm8815-201ENSMUST00000173809 620 ntBASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Gm25072-201ENSMUST00000175233 235 ntBASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Gm23771-201ENSMUST00000178702 110 ntBASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.84□□□□□ -0.51
Rrp8Q9DB85 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.84□□□□□ -0.51
Rrp8Q9DB85 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
Rrp8Q9DB85 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Gm12164-201ENSMUST00000121695 551 ntBASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Gm8737-201ENSMUST00000122208 642 ntBASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Gm6485-201ENSMUST00000160676 439 ntBASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Gm7593-201ENSMUST00000187246 644 ntBASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Gm34023-201ENSMUST00000195539 217 ntBASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Snora73b-201ENSMUST00000083419 205 ntBASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rrp8Q9DB85 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rrp8Q9DB85 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms