Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp5Q9D7S9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Gm24934-201ENSMUST00000103764 111 ntBASIC15.06■□□□□ 0
Chmp5Q9D7S9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Gm12490-201ENSMUST00000120255 560 ntBASIC15.06■□□□□ 0
Chmp5Q9D7S9 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.06■□□□□ 0
Chmp5Q9D7S9 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.06■□□□□ 0
Chmp5Q9D7S9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.06■□□□□ 0
Chmp5Q9D7S9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.06■□□□□ 0
Chmp5Q9D7S9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp5Q9D7S9 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Chmp5Q9D7S9 Gm43773-201ENSMUST00000198548 2162 ntBASIC15.05■□□□□ 0
Chmp5Q9D7S9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp5Q9D7S9 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp5Q9D7S9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chmp5Q9D7S9 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chmp5Q9D7S9 Gm14999-201ENSMUST00000121039 624 ntBASIC15.05■□□□□ -0
Chmp5Q9D7S9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Gm25927-201ENSMUST00000175058 117 ntBASIC15.05■□□□□ -0
Chmp5Q9D7S9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.05■□□□□ -0
Chmp5Q9D7S9 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.05■□□□□ -0
Chmp5Q9D7S9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Gm18782-201ENSMUST00000209023 1399 ntBASIC15.05■□□□□ -0
Chmp5Q9D7S9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.05■□□□□ -0
Chmp5Q9D7S9 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp5Q9D7S9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms