Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Gm11803-201ENSMUST00000119966 444 ntBASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Gm27331-201ENSMUST00000183705 60 ntBASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Gm27243-201ENSMUST00000183964 521 ntBASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Gm4768-201ENSMUST00000206199 686 ntBASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Gm32025-201ENSMUST00000217960 307 ntBASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nop56Q9D6Z1 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Gm6007-201ENSMUST00000208170 823 ntBASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Gm2423-201ENSMUST00000074863 733 ntBASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nop56Q9D6Z1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Gm12363-201ENSMUST00000122250 668 ntBASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nop56Q9D6Z1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms