Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Gm11989-201ENSMUST00000117240 672 ntBASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Gm11362-201ENSMUST00000118838 850 ntBASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Gm5070-201ENSMUST00000177599 862 ntBASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Gm5706-201ENSMUST00000181525 993 ntBASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx56Q9D0R4 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm7722-201ENSMUST00000120646 741 ntBASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm6963-201ENSMUST00000147879 379 ntBASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm8885-201ENSMUST00000189382 598 ntBASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm38341-201ENSMUST00000195357 515 ntBASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm44364-201ENSMUST00000198368 141 ntBASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm19187-201ENSMUST00000206781 892 ntBASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ddx56Q9D0R4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx56Q9D0R4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx56Q9D0R4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx56Q9D0R4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx56Q9D0R4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx56Q9D0R4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx56Q9D0R4 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ddx56Q9D0R4 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Gm15610-201ENSMUST00000120584 195 ntBASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Gm12164-201ENSMUST00000121695 551 ntBASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Gm3961-201ENSMUST00000204425 994 ntBASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.7□□□□□ -0.38
Ddx56Q9D0R4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms