Protein–RNA interactions for Protein: Q9D035

Nkain1, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkain1Q9D035 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkain1Q9D035 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkain1Q9D035 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkain1Q9D035 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkain1Q9D035 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.26□□□□□ -0.61
Nkain1Q9D035 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkain1Q9D035 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkain1Q9D035 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkain1Q9D035 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkain1Q9D035 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkain1Q9D035 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkain1Q9D035 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.25□□□□□ -0.61
Nkain1Q9D035 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Gm24891-201ENSMUST00000104391 136 ntBASIC11.25□□□□□ -0.61
Nkain1Q9D035 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Gm14263-201ENSMUST00000117955 746 ntBASIC11.25□□□□□ -0.61
Nkain1Q9D035 Gm14724-201ENSMUST00000118400 537 ntBASIC11.25□□□□□ -0.61
Nkain1Q9D035 Gm23085-201ENSMUST00000157849 293 ntBASIC11.25□□□□□ -0.61
Nkain1Q9D035 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Gm8100-201ENSMUST00000182906 988 ntBASIC11.25□□□□□ -0.61
Nkain1Q9D035 Gm28686-201ENSMUST00000187404 609 ntBASIC11.25□□□□□ -0.61
Nkain1Q9D035 Gm18893-201ENSMUST00000198416 943 ntBASIC11.25□□□□□ -0.61
Nkain1Q9D035 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Gm1821-202ENSMUST00000227415 750 ntBASIC11.25□□□□□ -0.61
Nkain1Q9D035 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.25□□□□□ -0.61
Nkain1Q9D035 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkain1Q9D035 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.25□□□□□ -0.61
Nkain1Q9D035 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkain1Q9D035 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.24□□□□□ -0.61
Nkain1Q9D035 Gm23251-201ENSMUST00000103773 110 ntBASIC11.24□□□□□ -0.61
Nkain1Q9D035 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.24□□□□□ -0.61
Nkain1Q9D035 Gm15610-201ENSMUST00000120584 195 ntBASIC11.24□□□□□ -0.61
Nkain1Q9D035 Gm11660-201ENSMUST00000120955 412 ntBASIC11.24□□□□□ -0.61
Nkain1Q9D035 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.24□□□□□ -0.61
Nkain1Q9D035 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Gm5733-201ENSMUST00000190232 939 ntBASIC11.24□□□□□ -0.61
Nkain1Q9D035 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.24□□□□□ -0.61
Nkain1Q9D035 Gm2965-201ENSMUST00000198365 343 ntBASIC11.24□□□□□ -0.61
Nkain1Q9D035 Gm9555-201ENSMUST00000200908 583 ntBASIC11.24□□□□□ -0.61
Nkain1Q9D035 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkain1Q9D035 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms