Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Gm27023-201ENSMUST00000182372 285 ntBASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Gm9136-201ENSMUST00000193368 454 ntBASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.42□□□□□ -0.42
Snf8Q9CZ28 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Gm12390-201ENSMUST00000117897 397 ntBASIC12.42□□□□□ -0.42
Snf8Q9CZ28 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Gm29127-201ENSMUST00000188304 517 ntBASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Gm42937-201ENSMUST00000197360 752 ntBASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snf8Q9CZ28 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Gm14999-201ENSMUST00000121039 624 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms