Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.19□□□□□ -0.14
Smc3Q9CW03 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Gm37008-201ENSMUST00000195712 319 ntBASIC14.19□□□□□ -0.14
Smc3Q9CW03 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.19□□□□□ -0.14
Smc3Q9CW03 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smc3Q9CW03 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Gm43984-201ENSMUST00000204572 2864 ntBASIC14.18□□□□□ -0.14
Smc3Q9CW03 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.18□□□□□ -0.14
Smc3Q9CW03 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Gm28882-201ENSMUST00000185504 314 ntBASIC14.18□□□□□ -0.14
Smc3Q9CW03 Gm42693-201ENSMUST00000196779 631 ntBASIC14.18□□□□□ -0.14
Smc3Q9CW03 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.18□□□□□ -0.14
Smc3Q9CW03 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.18□□□□□ -0.14
Smc3Q9CW03 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.18□□□□□ -0.14
Smc3Q9CW03 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc3Q9CW03 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.17□□□□□ -0.14
Smc3Q9CW03 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.17□□□□□ -0.14
Smc3Q9CW03 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Mir1247-201ENSMUST00000116706 82 ntBASIC14.17□□□□□ -0.14
Smc3Q9CW03 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Gm2546-201ENSMUST00000182630 991 ntBASIC14.17□□□□□ -0.14
Smc3Q9CW03 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.17□□□□□ -0.14
Smc3Q9CW03 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.17□□□□□ -0.14
Smc3Q9CW03 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.17□□□□□ -0.14
Smc3Q9CW03 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc3Q9CW03 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.16□□□□□ -0.14
Smc3Q9CW03 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms