Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 AW822252-206ENSMUST00000208904 237 ntBASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Gm24231-201ENSMUST00000104315 133 ntBASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Gm21854-201ENSMUST00000179901 471 ntBASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Gm4034-201ENSMUST00000187674 480 ntBASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
RTRAFQ9CQE8 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 135.3 ms