Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm12203-201ENSMUST00000118235 598 ntBASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm12209-201ENSMUST00000120089 596 ntBASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm8810-201ENSMUST00000172895 754 ntBASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm18018-201ENSMUST00000198273 408 ntBASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.88□□□□□ -0.67
Krt88Q9CPR6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Krt88Q9CPR6 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Gm24830-201ENSMUST00000102024 166 ntBASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Gm13315-201ENSMUST00000120376 991 ntBASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Gm12363-201ENSMUST00000122250 668 ntBASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Gm8018-201ENSMUST00000173536 789 ntBASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Gm28911-201ENSMUST00000188837 117 ntBASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Gm9908-201ENSMUST00000211534 448 ntBASIC10.87□□□□□ -0.67
Krt88Q9CPR6 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Krt88Q9CPR6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms