Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Gm6013-201ENSMUST00000212264 699 ntBASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Gm19994-201ENSMUST00000217086 586 ntBASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.76□□□□□ -0.21
Trim11Q99PQ2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Gm15370-201ENSMUST00000117158 253 ntBASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim11Q99PQ2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.75□□□□□ -0.21
Trim11Q99PQ2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Mir7085-201ENSMUST00000184353 66 ntBASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.75□□□□□ -0.21
Trim11Q99PQ2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.75□□□□□ -0.21
Trim11Q99PQ2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim11Q99PQ2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms