Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Gm13492-201ENSMUST00000119772 665 ntBASIC11.86□□□□□ -0.51
Trim8Q99PJ2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Gm27682-201ENSMUST00000183930 110 ntBASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Gm39404-201ENSMUST00000216350 313 ntBASIC11.86□□□□□ -0.51
Trim8Q99PJ2 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.86□□□□□ -0.51
Trim8Q99PJ2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Gm10268-201ENSMUST00000085340 555 ntBASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Gm16177-201ENSMUST00000120728 718 ntBASIC11.85□□□□□ -0.51
Trim8Q99PJ2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Mir1982-201ENSMUST00000157368 74 ntBASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Gm6222-202ENSMUST00000182143 629 ntBASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Gm6007-201ENSMUST00000208170 823 ntBASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim8Q99PJ2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim8Q99PJ2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms