Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Gm16030-201ENSMUST00000159098 603 ntBASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Gm25492-201ENSMUST00000157383 129 ntBASIC11.93□□□□□ -0.5
Cdh23Q99PF4 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.93□□□□□ -0.5
Cdh23Q99PF4 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cdh23Q99PF4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm11475-201ENSMUST00000118482 476 ntBASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm26313-201ENSMUST00000157770 308 ntBASIC11.92□□□□□ -0.5
Cdh23Q99PF4 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm7525-201ENSMUST00000219425 454 ntBASIC11.92□□□□□ -0.5
Cdh23Q99PF4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm9192-201ENSMUST00000183221 985 ntBASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdh23Q99PF4 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms