Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Usp11Q99K46 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.74□□□□□ -0.37
Usp11Q99K46 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.74□□□□□ -0.37
Usp11Q99K46 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.74□□□□□ -0.37
Usp11Q99K46 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm9630-201ENSMUST00000178304 885 ntBASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm2546-201ENSMUST00000182630 991 ntBASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm6621-201ENSMUST00000193251 772 ntBASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.74□□□□□ -0.37
Usp11Q99K46 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm26035-201ENSMUST00000083065 308 ntBASIC12.74□□□□□ -0.37
Usp11Q99K46 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.74□□□□□ -0.37
Usp11Q99K46 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp11Q99K46 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp11Q99K46 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.73□□□□□ -0.37
Usp11Q99K46 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.73□□□□□ -0.37
Usp11Q99K46 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usp11Q99K46 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.73□□□□□ -0.37
Usp11Q99K46 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usp11Q99K46 Gm13875-201ENSMUST00000120162 282 ntBASIC12.73□□□□□ -0.37
Usp11Q99K46 Gm13315-201ENSMUST00000120376 991 ntBASIC12.73□□□□□ -0.37
Usp11Q99K46 Gm13342-201ENSMUST00000121055 207 ntBASIC12.73□□□□□ -0.37
Usp11Q99K46 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.73□□□□□ -0.37
Usp11Q99K46 Rmrp-201ENSMUST00000157463 271 ntBASIC12.73□□□□□ -0.37
Usp11Q99K46 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp11Q99K46 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms