Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.01□□□□□ -0.65
Lims1Q99JW4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.01□□□□□ -0.65
Lims1Q99JW4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Gm13392-201ENSMUST00000117708 150 ntBASIC11.01□□□□□ -0.65
Lims1Q99JW4 Gm14660-201ENSMUST00000119809 575 ntBASIC11.01□□□□□ -0.65
Lims1Q99JW4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Gm27731-201ENSMUST00000185192 107 ntBASIC11.01□□□□□ -0.65
Lims1Q99JW4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Gm37424-201ENSMUST00000191727 561 ntBASIC11.01□□□□□ -0.65
Lims1Q99JW4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.01□□□□□ -0.65
Lims1Q99JW4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.01□□□□□ -0.65
Lims1Q99JW4 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Gm43242-201ENSMUST00000199507 1776 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11□□□□□ -0.65
Lims1Q99JW4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Gm45496-201ENSMUST00000209918 2917 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 Gm14441-201ENSMUST00000121960 540 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Lims1Q99JW4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
Lims1Q99JW4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11□□□□□ -0.65
Lims1Q99JW4 Gm28882-201ENSMUST00000185504 314 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11□□□□□ -0.65
Lims1Q99JW4 Gm38241-201ENSMUST00000192641 898 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11□□□□□ -0.65
Lims1Q99JW4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 AC159896.2-201ENSMUST00000214753 269 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 AC154319.1-201ENSMUST00000216330 312 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 Gm19994-201ENSMUST00000217086 586 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 AL589735.1-201ENSMUST00000224353 270 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 AC126253.1-201ENSMUST00000227974 824 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Lims1Q99JW4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Lims1Q99JW4 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Lims1Q99JW4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Gm8146-201ENSMUST00000192106 1847 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11□□□□□ -0.65
Lims1Q99JW4 Gm43075-201ENSMUST00000198613 3905 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Lims1Q99JW4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Lims1Q99JW4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11□□□□□ -0.65
Lims1Q99JW4 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lims1Q99JW4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lims1Q99JW4 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.99□□□□□ -0.65
Lims1Q99JW4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms