Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Mir6998-201ENSMUST00000183343 64 ntBASIC18.81■□□□□ 0.6
Clip1Q922J3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC18.81■□□□□ 0.6
Clip1Q922J3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
Clip1Q922J3 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC18.8■□□□□ 0.6
Clip1Q922J3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clip1Q922J3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Clip1Q922J3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Clip1Q922J3 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC18.8■□□□□ 0.6
Clip1Q922J3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Gm8459-201ENSMUST00000162504 760 ntBASIC18.8■□□□□ 0.6
Clip1Q922J3 Gm8492-201ENSMUST00000182375 987 ntBASIC18.8■□□□□ 0.6
Clip1Q922J3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Clip1Q922J3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip1Q922J3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm14132-201ENSMUST00000117188 1719 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC18.79■□□□□ 0.6
Clip1Q922J3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm12516-201ENSMUST00000120819 385 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC18.79■□□□□ 0.6
Clip1Q922J3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm28937-201ENSMUST00000185413 695 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm29400-201ENSMUST00000187208 695 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm28662-201ENSMUST00000188446 695 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm28251-201ENSMUST00000188835 695 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm37318-201ENSMUST00000194325 695 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm38017-201ENSMUST00000194768 695 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm37287-201ENSMUST00000195449 695 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm37793-201ENSMUST00000195548 695 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm42657-201ENSMUST00000201746 211 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm44158-201ENSMUST00000203881 505 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 Gm45484-201ENSMUST00000210310 1141 ntBASIC18.79■□□□□ 0.6
Clip1Q922J3 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC18.79■□□□□ 0.6
Clip1Q922J3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip1Q922J3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Clip1Q922J3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Gm9136-201ENSMUST00000193368 454 ntBASIC18.78■□□□□ 0.6
Clip1Q922J3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Clip1Q922J3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Clip1Q922J3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clip1Q922J3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Clip1Q922J3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Clip1Q922J3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Clip1Q922J3 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Clip1Q922J3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Clip1Q922J3 Gm7150-201ENSMUST00000122032 981 ntBASIC18.77■□□□□ 0.6
Clip1Q922J3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clip1Q922J3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms