Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm43916-201ENSMUST00000205062 967 ntBASIC14□□□□□ -0.17
Smc1bQ920F6 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14□□□□□ -0.17
Smc1bQ920F6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smc1bQ920F6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smc1bQ920F6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14□□□□□ -0.17
Smc1bQ920F6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smc1bQ920F6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Gm6407-201ENSMUST00000176468 549 ntBASIC13.99□□□□□ -0.17
Smc1bQ920F6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.99□□□□□ -0.17
Smc1bQ920F6 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.99□□□□□ -0.17
Smc1bQ920F6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Smc1bQ920F6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1bQ920F6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.98□□□□□ -0.17
Smc1bQ920F6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm14058-201ENSMUST00000116082 735 ntBASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm15515-201ENSMUST00000117827 822 ntBASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm14921-201ENSMUST00000118643 908 ntBASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm14460-201ENSMUST00000121511 639 ntBASIC13.98□□□□□ -0.17
Smc1bQ920F6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm17391-201ENSMUST00000171036 126 ntBASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm8365-201ENSMUST00000197334 648 ntBASIC13.98□□□□□ -0.17
Smc1bQ920F6 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.98□□□□□ -0.17
Smc1bQ920F6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc1bQ920F6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms