Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb1Q91Y08 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm9136-201ENSMUST00000193368 454 ntBASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm38341-201ENSMUST00000195357 515 ntBASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm45598-202ENSMUST00000210719 986 ntBASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm9257-201ENSMUST00000221254 232 ntBASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gzmn-202ENSMUST00000225535 989 ntBASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb1Q91Y08 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms