Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm27847-201ENSMUST00000183711 107 ntBASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm27375-201ENSMUST00000183799 107 ntBASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm44760-201ENSMUST00000206375 1173 ntBASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm44582-201ENSMUST00000209125 445 ntBASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm7561-201ENSMUST00000211203 886 ntBASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm9899-201ENSMUST00000065519 555 ntBASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm16372-201ENSMUST00000073088 450 ntBASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb3Q91XZ7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Gm6152-201ENSMUST00000151704 340 ntBASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Gm24196-201ENSMUST00000179161 110 ntBASIC12.29□□□□□ -0.44
Pcdhb3Q91XZ7 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms