Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb5Q91XZ5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb5Q91XZ5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb5Q91XZ5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb5Q91XZ5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm22920-201ENSMUST00000102175 109 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm12579-201ENSMUST00000118040 783 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm8731-201ENSMUST00000118088 412 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm9540-201ENSMUST00000188230 478 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm6867-201ENSMUST00000219165 425 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Snora73b-201ENSMUST00000083419 205 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb5Q91XZ5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb5Q91XZ5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb5Q91XZ5 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Pcdhb5Q91XZ5 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.21□□□□□ -0.14
Pcdhb5Q91XZ5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Pcdhb5Q91XZ5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb5Q91XZ5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdhb5Q91XZ5 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Gm11246-201ENSMUST00000120880 345 ntBASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Gm8737-201ENSMUST00000122208 642 ntBASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Gm17931-201ENSMUST00000208132 634 ntBASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Gm2517-201ENSMUST00000215651 348 ntBASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Gm10752-201ENSMUST00000218348 729 ntBASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Pcdhb5Q91XZ5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Gm23045-201ENSMUST00000175041 96 ntBASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Gm23771-201ENSMUST00000178702 110 ntBASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Gm27910-201ENSMUST00000185004 107 ntBASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb5Q91XZ5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms