Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 AC107452.3-201ENSMUST00000228807 1308 ntBASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Gm11637-201ENSMUST00000120601 592 ntBASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Gm2495-201ENSMUST00000191160 466 ntBASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Gm8515-201ENSMUST00000194852 576 ntBASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Gm43037-201ENSMUST00000196808 250 ntBASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa1Q8VEE4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Gm27243-201ENSMUST00000183964 521 ntBASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Gm37922-201ENSMUST00000195596 455 ntBASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Gm18829-201ENSMUST00000188150 1622 ntBASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpa1Q8VEE4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.21□□□□□ -0.45
Rpa1Q8VEE4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms