Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx39aQ8VDW0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx39aQ8VDW0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.41□□□□□ -0.26
Ddx39aQ8VDW0 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Gm18893-201ENSMUST00000198416 943 ntBASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Gm6905-201ENSMUST00000205729 511 ntBASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Gm29787-201ENSMUST00000222129 849 ntBASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Ginm1-202ENSMUST00000065124 300 ntBASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Gm5705-201ENSMUST00000066241 711 ntBASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx39aQ8VDW0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Gm13461-201ENSMUST00000120980 662 ntBASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Gm3508-201ENSMUST00000186012 792 ntBASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Gm2965-201ENSMUST00000198365 343 ntBASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx39aQ8VDW0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Gm8566-201ENSMUST00000120174 465 ntBASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx39aQ8VDW0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms