Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Gm14760-201ENSMUST00000121831 999 ntBASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.44□□□□□ -0.58
Ndc1Q8VCB1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Gm27552-201ENSMUST00000183351 62 ntBASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Gm27844-201ENSMUST00000183613 62 ntBASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Gm44124-201ENSMUST00000204159 472 ntBASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ndc1Q8VCB1 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.42□□□□□ -0.58
Ndc1Q8VCB1 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms