Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm13996-201ENSMUST00000118456 430 ntBASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm43962-201ENSMUST00000203898 190 ntBASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm45224-201ENSMUST00000208203 414 ntBASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Gm9136-201ENSMUST00000193368 454 ntBASIC13.23□□□□□ -0.29
Rpap2Q8VC34 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.23□□□□□ -0.29
Rpap2Q8VC34 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Gm26286-201ENSMUST00000104166 134 ntBASIC13.22□□□□□ -0.29
Rpap2Q8VC34 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Gm26083-201ENSMUST00000157904 193 ntBASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpap2Q8VC34 Gm8956-201ENSMUST00000203939 825 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms