Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.37□□□□□ -0.43
CopaQ8CIE6 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gm18212-201ENSMUST00000211678 889 ntBASIC12.37□□□□□ -0.43
CopaQ8CIE6 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.36□□□□□ -0.43
CopaQ8CIE6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.36□□□□□ -0.43
CopaQ8CIE6 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Gm11439-201ENSMUST00000118598 409 ntBASIC12.36□□□□□ -0.43
CopaQ8CIE6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.36□□□□□ -0.43
CopaQ8CIE6 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CopaQ8CIE6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopaQ8CIE6 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.35□□□□□ -0.43
CopaQ8CIE6 Gm14999-201ENSMUST00000121039 624 ntBASIC12.35□□□□□ -0.43
CopaQ8CIE6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Gm24845-201ENSMUST00000158034 109 ntBASIC12.35□□□□□ -0.43
CopaQ8CIE6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Gm25700-201ENSMUST00000177693 110 ntBASIC12.35□□□□□ -0.43
CopaQ8CIE6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 Gm27023-201ENSMUST00000182372 285 ntBASIC12.35□□□□□ -0.43
CopaQ8CIE6 Gm27341-201ENSMUST00000183570 106 ntBASIC12.35□□□□□ -0.43
CopaQ8CIE6 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.35□□□□□ -0.43
CopaQ8CIE6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms