Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.19□□□□□ -0.46
Clip4Q8CI96 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.19□□□□□ -0.46
Clip4Q8CI96 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Gm27320-201ENSMUST00000184892 109 ntBASIC12.19□□□□□ -0.46
Clip4Q8CI96 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.19□□□□□ -0.46
Clip4Q8CI96 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.19□□□□□ -0.46
Clip4Q8CI96 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.19□□□□□ -0.46
Clip4Q8CI96 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip4Q8CI96 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.18□□□□□ -0.46
Clip4Q8CI96 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.18□□□□□ -0.46
Clip4Q8CI96 Gm25214-201ENSMUST00000104573 129 ntBASIC12.18□□□□□ -0.46
Clip4Q8CI96 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Gm15703-201ENSMUST00000120250 880 ntBASIC12.18□□□□□ -0.46
Clip4Q8CI96 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.18□□□□□ -0.46
Clip4Q8CI96 Gm20482-202ENSMUST00000174729 825 ntBASIC12.18□□□□□ -0.46
Clip4Q8CI96 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.18□□□□□ -0.46
Clip4Q8CI96 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.18□□□□□ -0.46
Clip4Q8CI96 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.18□□□□□ -0.46
Clip4Q8CI96 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.18□□□□□ -0.46
Clip4Q8CI96 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip4Q8CI96 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Clip4Q8CI96 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip4Q8CI96 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip4Q8CI96 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Clip4Q8CI96 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip4Q8CI96 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Clip4Q8CI96 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms