Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Gm43947-201ENSMUST00000203019 959 ntBASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Gm10288-201ENSMUST00000084614 537 ntBASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rdh1Q8CGV4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm24891-201ENSMUST00000104391 136 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm14724-201ENSMUST00000118400 537 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm13045-201ENSMUST00000119019 712 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm15004-201ENSMUST00000119192 630 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm8566-201ENSMUST00000120174 465 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm11660-201ENSMUST00000120955 412 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm8199-201ENSMUST00000121323 823 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm5733-201ENSMUST00000190232 939 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm37246-201ENSMUST00000192665 835 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Gm2965-201ENSMUST00000198365 343 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rdh1Q8CGV4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 Gm12165-201ENSMUST00000117047 342 ntBASIC11.71□□□□□ -0.53
Rdh1Q8CGV4 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms