Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.83□□□□□ -0.35
Ccdc87Q8CDL9 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc87Q8CDL9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Gm6023-201ENSMUST00000118217 606 ntBASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Gm13315-201ENSMUST00000120376 991 ntBASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Gm8018-201ENSMUST00000173536 789 ntBASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.83□□□□□ -0.36
Ccdc87Q8CDL9 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc87Q8CDL9 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Gm12502-201ENSMUST00000120197 444 ntBASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc87Q8CDL9 Gm3890-201ENSMUST00000182416 207 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms