Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Gm6023-201ENSMUST00000118217 606 ntBASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Gm13875-201ENSMUST00000120162 282 ntBASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Gm11793-201ENSMUST00000120433 981 ntBASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Gm42937-201ENSMUST00000197360 752 ntBASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Gm43133-201ENSMUST00000197472 463 ntBASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcpip1Q8CDG3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Gm12241-201ENSMUST00000118330 726 ntBASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Gm38158-201ENSMUST00000194617 339 ntBASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Mir433-201ENSMUST00000093564 124 ntBASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcpip1Q8CDG3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Olfr284-202ENSMUST00000206647 966 ntBASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Gm6334-201ENSMUST00000207083 228 ntBASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcpip1Q8CDG3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms