Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Gm14726-201ENSMUST00000120623 896 ntBASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Gm15547-201ENSMUST00000122152 333 ntBASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Gm38266-201ENSMUST00000194931 421 ntBASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Gm38341-201ENSMUST00000195357 515 ntBASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Olfr582-201ENSMUST00000098212 960 ntBASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Gm43179-201ENSMUST00000198797 275 ntBASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Gm43822-201ENSMUST00000200285 476 ntBASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Sh3rf3Q8C120 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Sh3rf3Q8C120 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Sh3rf3Q8C120 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Mir1938-201ENSMUST00000158746 100 ntBASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Gm10312-201ENSMUST00000078515 489 ntBASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf3Q8C120 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms