Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim35Q8C006 AC134860.3-201ENSMUST00000223564 1300 ntBASIC13.63□□□□□ -0.23
Trim35Q8C006 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim35Q8C006 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm15625-201ENSMUST00000117617 1093 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm11798-201ENSMUST00000119150 421 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm12994-201ENSMUST00000119601 447 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trim35Q8C006 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm23186-201ENSMUST00000180078 107 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm4804-201ENSMUST00000182234 999 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm21470-201ENSMUST00000187680 696 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm20811-201ENSMUST00000190500 553 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm18426-201ENSMUST00000191874 973 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Gm43928-201ENSMUST00000203737 409 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 AC123692.1-201ENSMUST00000227514 730 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 AC130673.2-201ENSMUST00000228091 797 ntBASIC13.62□□□□□ -0.23
Trim35Q8C006 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Trim35Q8C006 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim35Q8C006 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim35Q8C006 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim35Q8C006 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim35Q8C006 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Trim35Q8C006 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Gm17132-201ENSMUST00000109542 1158 ntBASIC13.61□□□□□ -0.23
Trim35Q8C006 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim35Q8C006 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim35Q8C006 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trim35Q8C006 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim35Q8C006 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trim35Q8C006 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim35Q8C006 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Gm4874-201ENSMUST00000203589 691 ntBASIC13.61□□□□□ -0.23
Trim35Q8C006 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC13.61□□□□□ -0.23
Trim35Q8C006 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Gm5425-201ENSMUST00000214125 459 ntBASIC13.61□□□□□ -0.23
Trim35Q8C006 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim35Q8C006 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim35Q8C006 Gm6218-201ENSMUST00000219812 628 ntBASIC13.61□□□□□ -0.23
Trim35Q8C006 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim35Q8C006 AC130547.1-201ENSMUST00000228079 1047 ntBASIC13.61□□□□□ -0.23
Trim35Q8C006 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms