Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Gm3508-201ENSMUST00000186012 792 ntBASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Gm29787-201ENSMUST00000222129 849 ntBASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sh3rf2Q8BZT2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Gm15004-201ENSMUST00000119192 630 ntBASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Gm15610-201ENSMUST00000120584 195 ntBASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Gm5706-201ENSMUST00000181525 993 ntBASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf2Q8BZT2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf2Q8BZT2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms