Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp47Q8BY87 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Usp47Q8BY87 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp47Q8BY87 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC16.97■□□□□ 0.31
Usp47Q8BY87 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC16.97■□□□□ 0.31
Usp47Q8BY87 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Usp47Q8BY87 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp47Q8BY87 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC16.97■□□□□ 0.31
Usp47Q8BY87 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp47Q8BY87 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp47Q8BY87 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 CT025624.1-201ENSMUST00000224007 2700 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Usp47Q8BY87 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Gm28937-201ENSMUST00000185413 695 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 Gm29400-201ENSMUST00000187208 695 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Gm28662-201ENSMUST00000188446 695 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 Gm28251-201ENSMUST00000188835 695 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 Gm37318-201ENSMUST00000194325 695 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 Gm38017-201ENSMUST00000194768 695 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 Gm37287-201ENSMUST00000195449 695 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 Gm37793-201ENSMUST00000195548 695 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Usp47Q8BY87 AC113082.1-201ENSMUST00000217324 327 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 CT009713.8-202ENSMUST00000224732 385 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 AC108858.2-201ENSMUST00000228186 1425 ntBASIC16.96■□□□□ 0.31
Usp47Q8BY87 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp47Q8BY87 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp47Q8BY87 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Usp47Q8BY87 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Usp47Q8BY87 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Gm14263-201ENSMUST00000117955 746 ntBASIC16.95■□□□□ 0.3
Usp47Q8BY87 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Gm10774-201ENSMUST00000188689 204 ntBASIC16.95■□□□□ 0.3
Usp47Q8BY87 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Gm7940-201ENSMUST00000218195 769 ntBASIC16.95■□□□□ 0.3
Usp47Q8BY87 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.95■□□□□ 0.3
Usp47Q8BY87 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 AC157950.1-201ENSMUST00000217561 2168 ntBASIC16.95■□□□□ 0.3
Usp47Q8BY87 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp47Q8BY87 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC16.94■□□□□ 0.3
Usp47Q8BY87 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC16.94■□□□□ 0.3
Usp47Q8BY87 Gm9211-201ENSMUST00000182882 975 ntBASIC16.94■□□□□ 0.3
Usp47Q8BY87 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms