Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm23200-201ENSMUST00000104379 132 ntBASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm4909-201ENSMUST00000118749 794 ntBASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm12217-201ENSMUST00000118858 696 ntBASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm15004-201ENSMUST00000119192 630 ntBASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm12266-201ENSMUST00000120311 962 ntBASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm5705-201ENSMUST00000066241 711 ntBASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Gm26448-201ENSMUST00000082446 203 ntBASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nup54Q8BTS4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nup54Q8BTS4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nup54Q8BTS4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Nup54Q8BTS4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup54Q8BTS4 Gm23596-201ENSMUST00000104304 132 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms