Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm8566-201ENSMUST00000120174 465 ntBASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.81□□□□□ -0.36
Rd3Q8BRE0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Gm44551-201ENSMUST00000208804 171 ntBASIC12.81□□□□□ -0.36
Rd3Q8BRE0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rd3Q8BRE0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm4726-201ENSMUST00000135604 736 ntBASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm6019-201ENSMUST00000148369 736 ntBASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm8285-201ENSMUST00000208293 759 ntBASIC12.8□□□□□ -0.36
Rd3Q8BRE0 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.8□□□□□ -0.36
Rd3Q8BRE0 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm5705-201ENSMUST00000066241 711 ntBASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rd3Q8BRE0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Gm11956-201ENSMUST00000119525 512 ntBASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Gm14460-201ENSMUST00000121511 639 ntBASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Gm44882-201ENSMUST00000205702 802 ntBASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 Gm45575-201ENSMUST00000210283 548 ntBASIC12.79□□□□□ -0.36
Rd3Q8BRE0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.79□□□□□ -0.36
Rd3Q8BRE0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms