Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp2bQ8BJF9 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Chmp2bQ8BJF9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp2bQ8BJF9 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp2bQ8BJF9 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp2bQ8BJF9 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp2bQ8BJF9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp2bQ8BJF9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp2bQ8BJF9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Chmp2bQ8BJF9 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp2bQ8BJF9 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm4984-201ENSMUST00000115987 360 ntBASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm5781-201ENSMUST00000219792 443 ntBASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2bQ8BJF9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Gm24830-201ENSMUST00000102024 166 ntBASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Gm26232-201ENSMUST00000083360 166 ntBASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2bQ8BJF9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms