Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Gm5904-201ENSMUST00000210286 865 ntBASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.69□□□□□ -0.54
Rnf38Q8BI21 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gm13875-201ENSMUST00000120162 282 ntBASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Mir7085-201ENSMUST00000184353 66 ntBASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 AY702102-202ENSMUST00000194651 1173 ntBASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gm43438-201ENSMUST00000198133 379 ntBASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.68□□□□□ -0.54
Rnf38Q8BI21 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf38Q8BI21 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf38Q8BI21 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms