Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh8Q7TSK3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh8Q7TSK3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh8Q7TSK3 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.96□□□□□ -0.49
Pcdh8Q7TSK3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh8Q7TSK3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh8Q7TSK3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Gm22133-201ENSMUST00000102082 109 ntBASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Gm5616-201ENSMUST00000165252 384 ntBASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Gm8741-201ENSMUST00000174736 384 ntBASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Mir3547-201ENSMUST00000175461 88 ntBASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Gm26035-201ENSMUST00000083065 308 ntBASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh8Q7TSK3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Gm14263-201ENSMUST00000117955 746 ntBASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Gm20426-201ENSMUST00000173657 440 ntBASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 AU022133-201ENSMUST00000200601 873 ntBASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Gm43962-201ENSMUST00000203898 190 ntBASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Gm17827-201ENSMUST00000211825 742 ntBASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Gm8959-201ENSMUST00000213150 571 ntBASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh8Q7TSK3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 345.3 ms