Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Gm7029-201ENSMUST00000173226 450 ntBASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Gm27243-201ENSMUST00000183964 521 ntBASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Gm4034-201ENSMUST00000187674 480 ntBASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Gm16379-201ENSMUST00000161469 348 ntBASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Gm8762-201ENSMUST00000193486 339 ntBASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ctdp1Q7TSG2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Gm11964-201ENSMUST00000120982 444 ntBASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Gm11597-201ENSMUST00000121423 964 ntBASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ctdp1Q7TSG2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ctdp1Q7TSG2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ctdp1Q7TSG2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ctdp1Q7TSG2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ctdp1Q7TSG2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ctdp1Q7TSG2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ctdp1Q7TSG2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ctdp1Q7TSG2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ctdp1Q7TSG2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.15□□□□□ -0.3
Ctdp1Q7TSG2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms